Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX340593: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-148393' containing sample 'Escherichia coli UMEA 3257-1'
1 ILLUMINA (Illumina HiSeq 2000) run: 5.2M spots, 1G bases, 562.9Mb downloads

UUID: 23fdee91-d668-41a4-a677-2bd011da483b

Design: jumping library

Submitted by: Broad Institute (BI)

Study: E coli UTI Bacteremia

PRJNA186332 • SRP019693 • All experiments • All runs

Sample: Pathogen bacterial, clinical or host-associated sample from Escherichia coli UMEA 3257-1

SAMN01885942 • SRS402338 • All experiments • All runs

Organism: Escherichia coli UMEA 3257-1

Library:

Name: Solexa-148393

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 304095.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:42YR2

material_type: DNA:DNA Somatic

product_order: PDO-291

product_part_number: P-MCV-0001

project: G30316

research_project: RP-192

root_sample_id: SM-2TD5K

sample_id: SM-42YR2

work_request: 35932

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-05-09 06:21:59.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 5.2M spots, 1G bases, 562.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR958721	5,154,218	1G	562.9Mb	2013-08-28

ID:: 478377

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